Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogen fixation protein rnfbNCTC11190_01413Not AvailableNegative1701884 - 170283433220.2
positive regulator of sigma e activityNCTC11190_01414Not AvailableNegative1702834 - 170335518613.9
l-aspartate oxidaseNCTC11190_01415Not AvailablePositive1703452 - 170502658785.4
uncharacterised proteinNCTC11190_01416Not AvailableNegative1705116 - 170645048577.5
domain of uncharacterised function (duf2027)NCTC11190_01418Not AvailableNegative1707485 - 170868143537.7
s-adenosylmethionine:trna ribosyltransferase-isomeraseNCTC11190_01419Not AvailablePositive1708719 - 170992744669.2
uncharacterized protease ydeaNCTC11190_01420Not AvailablePositive1710077 - 171068521926.1
uncharacterized radical sam protein ygiqNCTC11190_01421Not AvailablePositive1710700 - 171249067855.5
replicative dna helicaseNCTC11190_01422Not AvailablePositive1712451 - 171405258162.3
beta-hexosaminidaseNot AvailableNot AvailablePositive1714258 - 171660385829.7

Displaying genes 1411 – 1420 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.