Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Coturnix japonica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted mannose-6-phosphate isomerase | NCTC11190_01343 | Not Available | Negative | 1632495 - 1632887 | 14399.9 |
| 4-carboxymuconolactone decarboxylase | NCTC11190_01344 | Not Available | Negative | 1632936 - 1633310 | 13800.8 |
| uncharacterized conserved protein | NCTC11190_01345 | Not Available | Negative | 1633320 - 1634381 | 39750.9 |
| putative oxidoreductase | NCTC11190_01346 | Not Available | Negative | 1634474 - 1635625 | 42504.1 |
| cyclopentanol dehydrogenase | NCTC11190_01347 | Not Available | Negative | 1635646 - 1636398 | 26560.0 |
| l-rhamnose operon regulatory protein rhas | NCTC11190_01348 | Not Available | Negative | 1636494 - 1637306 | 31540.7 |
| cystathionine beta-lyase patb | NCTC11190_01349 | Not Available | Negative | 1637418 - 1638584 | 43892.2 |
| multidrug-efflux transporter | NCTC11190_01350 | Not Available | Negative | 1638588 - 1640021 | 51154.3 |
| protein of uncharacterised function (duf3737) | NCTC11190_01351 | Not Available | Negative | 1640041 - 1640907 | 33049.9 |
| uncharacterised protein | NCTC11190_01352 | Not Available | Positive | 1641499 - 1641669 | 5794.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.