Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinNCTC11190_00087Not AvailablePositive115412 - 11587616986.6
domain of uncharacterised function (duf1083)NCTC11190_00088Not AvailablePositive116002 - 11708741437.7
uncharacterised proteinNCTC11190_00089Not AvailablePositive117555 - 11996991773.1
bacteroidetes-associated carbohydrate-binding often n-terminalNCTC11190_00090Not AvailableNegative120072 - 12129544635.5
lipoyl synthaseNCTC11190_00091Not AvailablePositive122033 - 12297134169.6
octanoyltransferaseNCTC11190_00092Not AvailablePositive122968 - 12366025165.2
single-stranded-dna-specific exonuclease recjNCTC11190_00093Not AvailablePositive124637 - 12639765461.1
putative glycogen debranching enzyme, archaeal typeNCTC11190_00094Not AvailablePositive126750 - 12874776642.0
capsular glucan synthaseNCTC11190_00095Not AvailablePositive128854 - 13014648551.4
membrane-anchored protein predicted to be involved in regulation of amylopullulanaseNCTC11190_00096Not AvailablePositive130217 - 13140446626.2

Displaying genes 121 – 130 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.