Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid a core - o-antigen ligase and related enzymesNCTC11190_01173Not AvailablePositive1425078 - 142667059460.4
toxin relkNCTC11190_01174Not AvailableNegative1426637 - 142695112047.6
nadp-dependent 3-hydroxy acid dehydrogenase ydfgNCTC11190_01175Not AvailableNegative1427543 - 142830127695.3
nucleoside diphosphate kinaseNCTC11190_01176Not AvailableNegative1428729 - 142920217567.9
ribosomal large subunit pseudouridine synthase dNCTC11190_01177Not AvailableNegative1429454 - 143053940648.4
pasta domainNCTC11190_01178Not AvailableNegative1430529 - 143150036289.6
putative menaquinone biosynthesis protein, sco4494 familyNCTC11190_01179Not AvailableNegative1431858 - 143298242361.8
50s ribosomal protein l34NCTC11190_01180Not AvailableNegative1433066 - 14332216070.44
elongation factor 4NCTC11190_01181Not AvailableNegative1433391 - 143517866534.8
protein of uncharacterised function (duf2807)NCTC11190_01182Not AvailablePositive1435751 - 143664130897.7

Displaying genes 1171 – 1180 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.