Prevotella intermedia

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella intermedia is a Gram-negative, anaerobic microbe that thrives in a wide range of temperatures, falling under the category of mesophiles. As a heterotroph, it obtains its energy by breaking down organic compounds. The microbe produces energy through anaerobic respiration, specifically via fermentation, which involves the conversion of glucose into lactic acid. Its metabolic processes are facilitated by the presence of enzymes such as lactate dehydrogenase. The Gram-stained smear of P. intermedia reveals a distinctive silver-gray color, characteristic of Gram-negative bacteria. Morphologically, the microbe exhibits a rod-shaped morphology, typically between 0.5-1.5 μm in length and 0.1-0.5 μm in width. P. intermedia is found in various body sites, including the oral cavity, respiratory tract, genital tract, and gastrointestinal tract, of both humans and animals. Its anaerobic nature allows it to colonize niches with low oxygen levels, such as periodontal pockets and the human gut. As an obligate anaerobe, P. intermedia requires a lack of oxygen to survive. In the presence of oxygen, the microbe may experience oxidative stress, leading to damage or even death. However, its ability to thrive in anaerobic environments enables it to play a significant role in the breakdown of complex organic matter. In addition to its ecological importance, P. intermedia has been implicated in various diseases, including periodontitis, respiratory infections, and female genital tract infections. Its ability to degrade complex organic compounds also contributes to its involvement in dental caries and dental implant failures. Despite its pathogenic potential, P. intermedia is an essential member of the human microbiome, playing a vital role in decomposing organic matter and recycling nutrients.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella intermedia
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgingival sulci; gut; oral cavity; rumen; subgingival and supragingival dental biofilms; subgingival plaque; urogenital tract
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Prevotella intermedia

Accession NumberQXEM00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2358 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna methylaseD2S53_00005Not Available+1 - 137952646.0
16s ribosomal rnaNot AvailableNot Available+164 - 1689Not Available
site-specific integraseD2S53_00010Not Available+1645 - 289848135.8
23s ribosomal rnaNot AvailableNot Available+2309 - 5208Not Available
5s ribosomal rnaNot AvailableNot Available+2582 - 2694Not Available
site-specific integraseD2S53_00015Not Available+2912 - 417448437.3
duf1896 domain-containing proteinD2S53_00020Not Available+4245 - 471217667.0
dna-binding proteinD2S53_00025Not Available+5395 - 566410396.3
dna-binding proteinD2S53_00030Not Available+5685 - 599912316.0
duf3408 domain-containing proteinD2S53_00035Not Available+5987 - 649320128.4

Displaying genes 1 – 10 of 2409 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites