Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas macacae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gingival crevicular fluid; oral cavity; subgingival plaque |
| Biotic relationship | Not Available |
| Host(s) | Canis lupus familiaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
652054 bp
Thymine Count
658537 bp
Guanine Count
511207 bp
Cytosine Count
507011 bp
Genome Length
2328809 bp
Protein-coding Genes
1939 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein omp28 | NCTC13100_00253 | Not Available | Positive | 280431 - 282158 | 63628.4 |
| thioredoxin | NCTC13100_00254 | Not Available | Positive | 282237 - 282710 | 18196.3 |
| uncharacterised protein | NCTC13100_00255 | Not Available | Positive | 282735 - 284309 | 59182.0 |
| alpha-amylase precursor | NCTC13100_00256 | Not Available | Negative | 284571 - 286043 | 56422.8 |
| dna recombination protein rmuc | NCTC13100_00257 | Not Available | Positive | 286253 - 287698 | 55206.6 |
| lipopolysaccharide core biosynthesis protein | NCTC13100_00258 | Not Available | Positive | 287967 - 289031 | 40619.1 |
| 23s rrna pseudouridine synthase f | NCTC13100_00259 | Not Available | Positive | 289055 - 289528 | 17826.6 |
| bifunctional rnase h/acid phosphatase | NCTC13100_00260 | Not Available | Positive | 289518 - 290135 | 23375.8 |
| ferritin | NCTC13100_00261 | Not Available | Positive | 290212 - 290694 | 18756.6 |
| transcriptional regulator, acidobacterial, padr-family | NCTC13100_00262 | Not Available | Positive | 291030 - 291464 | 16291.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
