Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas macacae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gingival crevicular fluid; oral cavity; subgingival plaque |
| Biotic relationship | Not Available |
| Host(s) | Canis lupus familiaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
652054 bp
Thymine Count
658537 bp
Guanine Count
511207 bp
Cytosine Count
507011 bp
Genome Length
2328809 bp
Protein-coding Genes
1939 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | NCTC13100_01262 | Not Available | Negative | 1471655 - 1471852 | 7533.48 |
| translation initiation factor if-3 | NCTC13100_01263 | Not Available | Negative | 1471910 - 1472497 | 22682.4 |
| threonine--trna ligase | NCTC13100_01264 | Not Available | Negative | 1472569 - 1474551 | 76272.3 |
| putative dna-binding protein | NCTC13100_01265 | Not Available | Positive | 1474945 - 1475412 | 17236.7 |
| retroviral aspartyl protease | NCTC13100_01266 | Not Available | Positive | 1475518 - 1476783 | 47527.7 |
| uncharacterised protein | NCTC13100_01267 | Not Available | Positive | 1477088 - 1477486 | 14736.2 |
| uncharacterised protein | NCTC13100_01268 | Not Available | Positive | 1477483 - 1477686 | 8081.53 |
| dna-damage-inducible protein d | NCTC13100_01269 | Not Available | Positive | 1477673 - 1478542 | 33223.6 |
| uncharacterised protein | NCTC13100_01270 | Not Available | Positive | 1478550 - 1478732 | 7229.32 |
| transposase domain (duf772) | NCTC13100_01271 | Not Available | Negative | 1478750 - 1480417 | 64809.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
