Phyllobacterium myrsinacearum str. DSM 5892

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium myrsinacearum strain DSM 5892 is a Gram-negative, rod-shaped bacterium that requires aerobic conditions for growth. This microbe is a member of the Phyllobacterium genus, which is characterized by its distinct morphological and physiological traits. As an aerobic organism, P. myrsinacearum is adapted to environments where oxygen is readily available, which may influence its ecological niches and interactions with other microorganisms. The Gram-negative nature of P. myrsinacearum suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural characteristic typically confers a degree of resilience against certain environmental stresses and may impact its interactions with other microbial species or host organisms. While specific ecological roles and interactions have not been detailed, the aerobic metabolism of P. myrsinacearum implies a potential involvement in biogeochemical cycles, particularly those related to nitrogen or carbon cycling, depending on its substrate utilization capabilities. Further studies could elucidate its specific contributions to ecosystems, particularly in relation to its interactions with plant species, as indicated by the genus name, which is often associated with plants. Understanding the ecological significance of P. myrsinacearum could provide insights into the roles of aerobic bacteria in nutrient cycling and plant-microbe interactions within various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium myrsinacearum
StrainDSM 5892

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium myrsinacearum strain DSM 5892 ZB100049, whole

Gene Summary

Adenine Count

1102559 bp

Thymine Count

1109625 bp

Guanine Count

1625448 bp

Cytosine Count

1600068 bp

Genome Length

5437700 bp

Protein-coding Genes

5133 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucyl/phenylalanyl-trna--protein transferaseC5750_04560Not AvailableNegative949452 - 95006623003.4
type ii 3-dehydroquinate dehydrataseC5750_04570Not AvailableNegative951955 - 95239815759.0
disulfide bond formation protein dsbaC5750_04575Not AvailableNegative952638 - 95342628279.1
peptidaseC5750_04580Not AvailableNegative953479 - 95487649888.9
ribonuclease e/gC5750_04585Not AvailableNegative955070 - 957991107152.0
n-acetylmuramoyl-l-alanine amidaseC5750_04590Not AvailablePositive958798 - 96002744712.3
penicillin-binding proteinC5750_04595Not AvailablePositive960317 - 96277689403.2
peptide chain release factor 2C5750_04600Not AvailablePositive962890 - 96401841982.3
peptidaseC5750_04605Not AvailableNegative964110 - 96538445441.1
thioredoxin-dependent thiol peroxidaseC5750_04610Not AvailableNegative965520 - 96598717204.7

Displaying genes 931 – 940 of 5201 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.