Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twitching motility protein pilt | A6U92_00140 | Not Available | + | 28741 - 29148 | 15096.1 |
| holliday junction dna helicase ruvb | A6U92_00145 | Q8U9K6 | + | 29145 - 30185 | 38217.4 |
| metallophosphoesterase | A6U92_00150 | Q9RRY7 | + | 30188 - 31081 | 32401.1 |
| hypothetical protein | A6U92_00155 | Not Available | + | 31133 - 31351 | 8084.52 |
| damage-inducible protein dinb | A6U92_00160 | Not Available | + | 31408 - 31989 | 21975.1 |
| dna mismatch repair protein mutt | A6U92_00165 | Not Available | + | 31982 - 32494 | 20145.0 |
| tol-pal system-associated acyl-coa thioesterase | A6U92_00170 | P44679 | + | 32594 - 33034 | 16551.1 |
| protein tolq | A6U92_00175 | P50598 | + | 33295 - 34014 | 25760.4 |
| protein tolr | A6U92_00180 | P50599 | + | 34044 - 34505 | 15835.2 |
| hypothetical protein | A6U92_00185 | Not Available | + | 34513 - 35697 | 41604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
