Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Equus caballus, Rubus sp. |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_03265 | Not Available | Negative | 664080 - 664979 | 31559.7 |
| transcriptional regulator | A6U92_03270 | P96683 | Positive | 665105 - 665842 | 26248.5 |
| xanthine phosphoribosyltransferase | A6U92_03275 | Q8UEM6 | Negative | 665880 - 666377 | 18390.2 |
| hypothetical protein | A6U92_03280 | Not Available | Negative | 666510 - 667367 | 31691.7 |
| Trna-glu | Not Available | Not Available | Positive | 667873 - 667947 | Not Available |
| hypothetical protein | A6U92_03290 | Not Available | Positive | 668045 - 668635 | 22045.7 |
| glyoxalase | A6U92_03295 | Not Available | Positive | 668705 - 669154 | 16054.2 |
| hypothetical protein | A6U92_03300 | Not Available | Positive | 669249 - 669779 | 19889.1 |
| phna-like protein | A6U92_03305 | Not Available | Negative | 670016 - 670915 | 30264.9 |
| aaa family atpase | A6U92_03310 | Not Available | Negative | 671100 - 671972 | 32533.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
