Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Equus caballus, Rubus sp. |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | A6U92_02150 | Not Available | Negative | 451415 - 452137 | 25783.9 |
| hypothetical protein | A6U92_02155 | Not Available | Positive | 452267 - 452518 | 9452.51 |
| hypothetical protein | A6U92_02160 | Not Available | Positive | 452646 - 453884 | 45649.1 |
| nicotinamidase | A6U92_02165 | P21369 | Negative | 453946 - 454572 | 22479.3 |
| hypothetical protein | A6U92_02170 | Not Available | Positive | 455014 - 456297 | 45179.1 |
| hypothetical protein | A6U92_02175 | Not Available | Negative | 456304 - 456726 | 14826.6 |
| hypothetical protein | A6U92_02180 | Not Available | Negative | 456723 - 457205 | 16636.7 |
| hypothetical protein | A6U92_02185 | Not Available | Positive | 457274 - 457480 | 7540.48 |
| hypothetical protein | A6U92_02190 | Not Available | Negative | 457635 - 457955 | 12483.2 |
| hypothetical protein | A6U92_02195 | Not Available | Positive | 458061 - 458852 | 30423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
