Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN06295900_10218 | Not Available | Positive | 811656 - 812300 | 23124.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_10219 | Not Available | Negative | 812270 - 813226 | 35711.6 |
| hypothetical protein | SAMN06295900_10220 | Not Available | Negative | 813223 - 814101 | 33756.0 |
| short-chain dehydrogenase | SAMN06295900_10221 | Not Available | Negative | 814098 - 815021 | 32765.0 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN06295900_10222 | Not Available | Negative | 815115 - 816656 | 57039.6 |
| putative addiction module killer protein | SAMN06295900_10223 | Not Available | Positive | 816786 - 817253 | 17308.3 |
| probable addiction module antidote protein | SAMN06295900_10224 | Not Available | Positive | 817193 - 817495 | 10712.9 |
| glutamine synthetase | SAMN06295900_10225 | Not Available | Negative | 817524 - 818858 | 50103.2 |
| transcriptional regulator, merr family | SAMN06295900_10226 | Not Available | Negative | 819083 - 820000 | 33643.5 |
| response regulator receiver domain-containing protein | SAMN06295900_10227 | Not Available | Positive | 820113 - 820640 | 19083.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.