Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glycero-alpha-d-manno-heptose-7-phosphate kinase | SAMN06295900_101673 | Not Available | Positive | 723963 - 724958 | 37264.7 |
| gdp-l-fucose synthase | SAMN06295900_101674 | Not Available | Positive | 724963 - 725913 | 33966.7 |
| transketolase | SAMN06295900_101675 | Not Available | Positive | 725891 - 726742 | 30854.9 |
| transketolase | SAMN06295900_101676 | Not Available | Positive | 726739 - 727704 | 34720.1 |
| cdp-6-deoxy-d-xylo-4-hexulose-3-dehydrase | SAMN06295900_101677 | Not Available | Positive | 727746 - 728918 | 44217.5 |
| d-glycero-alpha-d-manno-heptose 1-phosphate guanylyltransferase | SAMN06295900_101678 | Not Available | Positive | 728924 - 729628 | 25602.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295900_101679 | Not Available | Positive | 729701 - 730639 | 34752.1 |
| lipopolysaccharide transport system permease protein/teichoic acid transport system permease protein | SAMN06295900_101680 | Not Available | Positive | 730684 - 731502 | 30770.5 |
| lipopolysaccharide transport system atp-binding protein | SAMN06295900_101681 | Not Available | Positive | 731492 - 732853 | 49374.2 |
| hypothetical protein | SAMN06295900_101682 | Not Available | Positive | 732850 - 734436 | 59215.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.