Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase, alpha subunit | SAMN06295900_101663 | Not Available | Positive | 712627 - 713640 | 37821.8 |
| phenylalanyl-trna synthetase beta subunit | SAMN06295900_101664 | Not Available | Positive | 713769 - 716201 | 88858.7 |
| integration host factor subunit alpha | SAMN06295900_101665 | Not Available | Positive | 716223 - 716678 | 16518.7 |
| transcriptional regulator, merr family | SAMN06295900_101666 | Not Available | Positive | 716729 - 717139 | 15717.1 |
| Trna-pro | Not Available | Not Available | Positive | 717193 - 717266 | Not Available |
| transcriptional regulator, iclr family | SAMN06295900_101668 | Not Available | Negative | 717495 - 718238 | 26432.1 |
| nitrilase | SAMN06295900_101669 | Not Available | Positive | 718359 - 719348 | 35864.9 |
| l-threonine ammonia-lyase | SAMN06295900_101670 | Not Available | Positive | 719345 - 720271 | 31993.6 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN06295900_101671 | Not Available | Negative | 720396 - 721571 | 43601.1 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN06295900_101672 | Not Available | Positive | 722427 - 723953 | 57039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.