Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase subunit a | SAMN06295900_101652 | Not Available | Positive | 703541 - 704245 | 25242.3 |
| 3-oxoacid coa-transferase subunit b | SAMN06295900_101653 | Not Available | Positive | 704247 - 704888 | 22171.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_101654 | Not Available | Positive | 705073 - 705975 | 32608.1 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN06295900_101655 | Not Available | Positive | 706058 - 706411 | 12810.4 |
| gtp pyrophosphokinase | SAMN06295900_101656 | Not Available | Positive | 706472 - 708697 | 82276.2 |
| Trna-val | Not Available | Not Available | Positive | 708780 - 708853 | Not Available |
| threonyl-trna synthetase | SAMN06295900_101658 | Not Available | Positive | 709140 - 711047 | 72187.1 |
| bacterial translation initiation factor 3 (bif-3) | SAMN06295900_101659 | Not Available | Positive | 711149 - 711619 | 18098.4 |
| lsu ribosomal protein l35p | SAMN06295900_101661 | Not Available | Positive | 711886 - 712083 | 7273.15 |
| lsu ribosomal protein l20p | SAMN06295900_101662 | Not Available | Positive | 712114 - 712473 | 13644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.