Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_101642 | Not Available | Negative | 692797 - 693117 | 12082.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_101643 | Not Available | Negative | 693276 - 694160 | 30883.1 |
| o-acetylhomoserine sulfhydrylase | SAMN06295900_101644 | Not Available | Negative | 694157 - 695539 | 48770.2 |
| cbs domain-containing protein | SAMN06295900_101645 | Not Available | Positive | 695698 - 696156 | 17297.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN06295900_101646 | Not Available | Positive | 696368 - 698284 | 69262.6 |
| chorismate synthase | SAMN06295900_101647 | Not Available | Positive | 698395 - 699495 | 39060.5 |
| electron-transferring-flavoprotein dehydrogenase | SAMN06295900_101648 | Not Available | Negative | 699618 - 701291 | 60675.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_101649 | Not Available | Positive | 701485 - 702264 | 27588.5 |
| (3s)-malyl-coa thioesterase | SAMN06295900_101650 | Not Available | Positive | 702310 - 702747 | 16379.6 |
| transcriptional regulator, luxr family | SAMN06295900_101651 | Not Available | Negative | 702761 - 703327 | 21337.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.