Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate 1,2-dioxygenase | SAMN06295900_101632 | Not Available | Positive | 681803 - 683191 | 52075.4 |
| anthranilate 1,2-dioxygenase | SAMN06295900_101633 | Not Available | Positive | 683195 - 683692 | 19267.7 |
| anthranilate 1,2-dioxygenase reductase subunit | SAMN06295900_101634 | Not Available | Positive | 683709 - 684749 | 38542.7 |
| transcriptional regulator, arac family | SAMN06295900_101635 | Not Available | Positive | 684858 - 685856 | 37277.7 |
| signal transduction histidine kinase | SAMN06295900_101636 | Not Available | Positive | 686085 - 687842 | 64153.3 |
| calcineurin-like phosphoesterase | SAMN06295900_101637 | Not Available | Negative | 687881 - 688702 | 29895.9 |
| fad/fmn-containing dehydrogenase | SAMN06295900_101638 | Not Available | Negative | 688734 - 690164 | 50503.5 |
| uncharacterized membrane protein | SAMN06295900_101639 | Not Available | Negative | 690252 - 690746 | 17717.8 |
| nad(p)h dehydrogenase (quinone) | SAMN06295900_101640 | Not Available | Negative | 690743 - 691345 | 20607.8 |
| pp_00624 | SAMN06295900_101641 | Not Available | Positive | 691467 - 692780 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.