Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | SAMN06295900_1421 | Not Available | Positive | 6533123 - 6533901 | 27877.4 |
| 2-methylcitrate synthase | SAMN06295900_1422 | Not Available | Positive | 6533928 - 6534970 | 37884.4 |
| acetyl-coenzyme a synthetase | SAMN06295900_1431 | Not Available | Positive | 6534971 - 6536752 | 64843.9 |
| rhs element vgr protein | SAMN06295900_1441 | Not Available | Positive | 6536755 - 6538062 | 49935.9 |
| phage late control gene d protein (gpd) | SAMN06295900_1451 | Not Available | Positive | 6538180 - 6539351 | 43418.6 |
| hypothetical protein | SAMN06295900_1461 | Not Available | Positive | 6539352 - 6539474 | 4486.23 |
| transposase | SAMN06295900_1462 | Not Available | Positive | 6539520 - 6540523 | 37622.2 |
| amino acid adenylation domain-containing protein | SAMN06295900_1471 | Not Available | Negative | 6540524 - 6541599 | 38892.7 |
| amino acid adenylation domain-containing protein | SAMN06295900_1481 | Not Available | Negative | 6541600 - 6542636 | 36822.5 |
| rhs element vgr protein | SAMN06295900_1491 | Not Available | Positive | 6542637 - 6543650 | 38356.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.