Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_1323 | Not Available | Positive | 6497528 - 6497932 | 14791.6 |
| hypothetical protein | SAMN06295900_1324 | Not Available | Negative | 6497951 - 6498097 | 5267.43 |
| hypothetical protein | SAMN06295900_1325 | Not Available | Negative | 6498510 - 6498764 | 9901.3 |
| hypothetical protein | SAMN06295900_1326 | Not Available | Positive | 6499012 - 6499308 | 11160.3 |
| hypothetical protein | SAMN06295900_1327 | Not Available | Positive | 6499625 - 6500638 | 33137.9 |
| hxxpf-repeated domain-containing protein | SAMN06295900_1331 | Not Available | Negative | 6502061 - 6503604 | 56131.3 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN06295900_1332 | Not Available | Negative | 6503663 - 6507874 | 151523.0 |
| Trna-ile | Not Available | Not Available | Positive | 6511479 - 6511555 | Not Available |
| mfs transporter, acs family, glucarate transporter | SAMN06295900_1351 | Not Available | Negative | 6513818 - 6515173 | 48865.4 |
| arylsulfatase a | SAMN06295900_1352 | Not Available | Negative | 6515428 - 6516939 | 56939.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.