Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_1313 | Not Available | Negative | 6489707 - 6489955 | 8803.66 |
| uncharacterized alpha/beta hydrolase domain | SAMN06295900_1314 | Not Available | Negative | 6489959 - 6492055 | 75260.0 |
| protein of unknown function | SAMN06295900_1315 | Not Available | Negative | 6492067 - 6492528 | 16824.9 |
| protein of unknown function | SAMN06295900_1316 | Not Available | Negative | 6492545 - 6492994 | 16534.7 |
| protein of unknown function | SAMN06295900_1317 | Not Available | Negative | 6493011 - 6493460 | 16458.6 |
| hypothetical protein | SAMN06295900_1318 | Not Available | Negative | 6493522 - 6493740 | 8315.23 |
| protein of unknown function | SAMN06295900_1319 | Not Available | Negative | 6493795 - 6494721 | 34824.3 |
| uncharacterized conserved protein, duf2345 family | SAMN06295900_13110 | Not Available | Negative | 6494732 - 6495868 | 40539.4 |
| hypothetical protein | SAMN06295900_1321 | Not Available | Positive | 6496335 - 6496445 | 4225.12 |
| hypothetical protein | SAMN06295900_1322 | Not Available | Positive | 6496911 - 6497528 | 20565.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.