Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein icmf c-terminal | SAMN06295900_12921 | Not Available | Negative | 6476417 - 6478604 | 78898.6 |
| hypothetical protein | SAMN06295900_1301 | Not Available | Negative | 6478605 - 6479747 | 43057.8 |
| hypothetical protein | SAMN06295900_1302 | Not Available | Negative | 6479744 - 6481027 | 46549.3 |
| uncharacterized alpha/beta hydrolase domain | SAMN06295900_1303 | Not Available | Negative | 6481352 - 6483592 | 83904.6 |
| protein of unknown function | SAMN06295900_1304 | Not Available | Negative | 6483585 - 6484382 | 29495.9 |
| protein of unknown function | SAMN06295900_1305 | Not Available | Negative | 6484379 - 6485176 | 29773.6 |
| protein of unknown function | SAMN06295900_1306 | Not Available | Negative | 6485181 - 6486158 | 38198.3 |
| uncharacterized conserved protein, duf2345 family | SAMN06295900_1307 | Not Available | Negative | 6486158 - 6487297 | 40257.1 |
| hypothetical protein | SAMN06295900_1311 | Not Available | Negative | 6487298 - 6488455 | 42939.4 |
| hypothetical protein | SAMN06295900_1312 | Not Available | Negative | 6488452 - 6489696 | 45158.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.