Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ca2+/h+ antiporter, tmem165/gdt1 family | SAMN06295900_101572 | Not Available | Negative | 614269 - 614964 | 24327.3 |
| guanine deaminase | SAMN06295900_101573 | Not Available | Negative | 615136 - 616482 | 49493.6 |
| adenosine deaminase | SAMN06295900_101574 | Not Available | Negative | 616516 - 617544 | 37632.7 |
| molybdenum cofactor sulfurylase | SAMN06295900_101575 | Not Available | Negative | 617525 - 618610 | 38829.7 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN06295900_101576 | Not Available | Negative | 618629 - 621025 | 85104.8 |
| xanthine dehydrogenase small subunit | SAMN06295900_101577 | Not Available | Negative | 621022 - 622554 | 54547.6 |
| thiol:disulfide interchange protein dsbb | SAMN06295900_101578 | Not Available | Negative | 622929 - 623447 | 18704.6 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN06295900_101579 | Not Available | Negative | 623545 - 624924 | 47955.6 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase puud (putrescine degradation), contains gatase1-like domain | SAMN06295900_101580 | Not Available | Positive | 625170 - 626513 | 47413.3 |
| Trna-gly | Not Available | Not Available | Positive | 626624 - 626696 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.