Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein alpha subunit apoprotein | SAMN06295900_12612 | Not Available | Negative | 6388128 - 6389306 | 40700.5 |
| fe-s oxidoreductase | SAMN06295900_12613 | Not Available | Negative | 6389311 - 6391236 | 68274.1 |
| 2,4-dienoyl-coa reductase | SAMN06295900_12614 | Not Available | Negative | 6391239 - 6393302 | 75554.7 |
| v4r domain-containing protein | SAMN06295900_12615 | Not Available | Negative | 6393355 - 6393888 | 19870.6 |
| membrane dipeptidase | SAMN06295900_12616 | Not Available | Negative | 6393992 - 6394963 | 35791.8 |
| serine hydroxymethyltransferase | SAMN06295900_12617 | Not Available | Negative | 6394994 - 6396268 | 45773.6 |
| mfs transporter, mhs family, proline/betaine transporter | SAMN06295900_12618 | Not Available | Positive | 6396874 - 6398340 | 51956.5 |
| iron complex transport system permease protein | SAMN06295900_12619 | Not Available | Negative | 6398439 - 6400412 | 67516.6 |
| iron complex transport system substrate-binding protein | SAMN06295900_12620 | Not Available | Negative | 6400430 - 6401470 | 35846.3 |
| iron complex outermembrane recepter protein | SAMN06295900_12621 | Not Available | Negative | 6401470 - 6403683 | 81293.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.