Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein terc, possibly involved in tellurium resistance | SAMN06295900_12526 | Not Available | Negative | 6365687 - 6366448 | 27292.2 |
| transcriptional regulator, lysr family | SAMN06295900_12527 | Not Available | Positive | 6366577 - 6367458 | 32114.0 |
| uncharacterized conserved protein, duf4415 family | SAMN06295900_12528 | Not Available | Negative | 6367473 - 6367730 | 10100.0 |
| hypothetical protein | SAMN06295900_12529 | Not Available | Negative | 6367708 - 6367986 | 10869.8 |
| hypothetical protein | SAMN06295900_12530 | Not Available | Positive | 6368631 - 6368879 | 9474.21 |
| hypothetical protein | SAMN06295900_12531 | Not Available | Negative | 6370260 - 6371258 | 36764.1 |
| rhs repeat-associated core domain-containing protein | SAMN06295900_12532 | Not Available | Negative | 6371259 - 6375581 | 159644.0 |
| hypothetical protein | SAMN06295900_12533 | Not Available | Negative | 6375605 - 6376033 | 15576.0 |
| hypothetical protein | SAMN06295900_12534 | Not Available | Negative | 6376119 - 6376397 | 9791.52 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN06295900_1261 | Not Available | Negative | 6377171 - 6377542 | 13649.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.