Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_12516 | Not Available | Positive | 6354409 - 6354999 | 21907.2 |
| hypothetical protein | SAMN06295900_12517 | Not Available | Positive | 6355120 - 6355443 | 12262.2 |
| chromate transporter | SAMN06295900_12518 | Not Available | Positive | 6355736 - 6356713 | 32768.0 |
| 1-cys peroxiredoxin | SAMN06295900_12519 | Not Available | Negative | 6356744 - 6357397 | 24091.8 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN06295900_12520 | Not Available | Positive | 6357995 - 6360427 | 88540.5 |
| assimilatory nitrite reductase (nad(p)h) small subunit | SAMN06295900_12521 | Not Available | Positive | 6360438 - 6360764 | 11738.0 |
| assimilatory nitrate reductase (nadh) alpha subunit apoprotein | SAMN06295900_12522 | Not Available | Positive | 6360781 - 6363498 | 98382.1 |
| response regulator receiver and antar domain protein | SAMN06295900_12523 | Not Available | Positive | 6363507 - 6364082 | 21362.0 |
| nitrate/nitrite transport system substrate-binding protein | SAMN06295900_12524 | Not Available | Positive | 6364085 - 6365206 | 40562.8 |
| hypothetical protein | SAMN06295900_12525 | Not Available | Negative | 6365291 - 6365590 | 11887.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.