Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transport system permease protein | SAMN06295900_12424 | Not Available | Positive | 6317162 - 6318082 | 33625.9 |
| glutathione transport system permease protein | SAMN06295900_12425 | Not Available | Positive | 6318090 - 6319034 | 33252.7 |
| d-aminopeptidase | SAMN06295900_12426 | Not Available | Positive | 6319031 - 6320212 | 41524.9 |
| d-aminopeptidase dppa. metallo peptidase. merops family m55 | SAMN06295900_12427 | Not Available | Positive | 6320209 - 6321042 | 29378.1 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN06295900_12428 | Not Available | Negative | 6321073 - 6321972 | 32874.1 |
| predicted oxidoreductase | SAMN06295900_12429 | Not Available | Positive | 6322152 - 6323204 | 38685.8 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN06295900_12430 | Not Available | Positive | 6323438 - 6324781 | 48032.8 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN06295900_12431 | Not Available | Positive | 6324815 - 6326740 | 68642.7 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN06295900_12432 | Not Available | Positive | 6326737 - 6328089 | 49375.2 |
| protein of unknown function | SAMN06295900_12433 | Not Available | Positive | 6328256 - 6328489 | 8725.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.