Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa transferase | SAMN06295900_12364 | Not Available | Positive | 6278657 - 6279829 | 41522.8 |
| enoyl-coa hydratase/carnithine racemase | SAMN06295900_12365 | Not Available | Positive | 6279826 - 6280572 | 27569.2 |
| predicted metal-dependent enzyme of the double-stranded beta helix superfamily | SAMN06295900_12366 | Not Available | Positive | 6280634 - 6281209 | 21710.6 |
| transcriptional regulator, marr family | SAMN06295900_12367 | Not Available | Negative | 6281321 - 6281734 | 15171.3 |
| vanillin synthase /trans-feruloyl-coa hydratase | SAMN06295900_12368 | Not Available | Positive | 6281950 - 6282777 | 30831.9 |
| aldehyde dehydrogenase family protein | SAMN06295900_12369 | Not Available | Positive | 6282816 - 6283199 | 13254.7 |
| is66 orf2 like protein | SAMN06295900_12370 | Not Available | Positive | 6283231 - 6283584 | 14393.6 |
| transposase | SAMN06295900_12371 | Not Available | Positive | 6283674 - 6285251 | 58998.1 |
| transcriptional regulator, tetr family | SAMN06295900_12372 | Not Available | Negative | 6285406 - 6285987 | 20990.1 |
| alpha/beta hydrolase fold | SAMN06295900_12373 | Not Available | Positive | 6286243 - 6287373 | 41315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.