Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN06295900_12354 | Not Available | Negative | 6267773 - 6268312 | 20402.5 |
| enoyl-coa hydratase | SAMN06295900_12355 | Not Available | Positive | 6269018 - 6269758 | 26117.8 |
| d-lactate dehydrogenase (cytochrome) | SAMN06295900_12356 | Not Available | Positive | 6269760 - 6271160 | 50176.0 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN06295900_12357 | Not Available | Positive | 6271244 - 6272464 | 43710.6 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN06295900_12358 | Not Available | Positive | 6272464 - 6273321 | 31043.5 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06295900_12359 | Not Available | Positive | 6273371 - 6273715 | 11954.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06295900_12360 | Not Available | Positive | 6273799 - 6274734 | 34436.7 |
| transcriptional regulator, lysr family | SAMN06295900_12361 | Not Available | Negative | 6274762 - 6275664 | 33364.7 |
| mfs transporter, acs family, phthalate transporter | SAMN06295900_12362 | Not Available | Positive | 6275903 - 6277234 | 47392.1 |
| porin, gbp family | SAMN06295900_12363 | Not Available | Positive | 6277316 - 6278560 | 44377.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.