Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible protein a | SAMN06295900_12334 | Not Available | Positive | 6246817 - 6247917 | 39933.1 |
| paraquat-inducible protein b | SAMN06295900_12335 | Not Available | Positive | 6247994 - 6249538 | 55593.6 |
| hypothetical protein | SAMN06295900_12336 | Not Available | Positive | 6249535 - 6250122 | 20882.3 |
| sugar phosphate permease | SAMN06295900_12337 | Not Available | Negative | 6251480 - 6252847 | 48737.8 |
| hypothetical protein | SAMN06295900_12338 | Not Available | Negative | 6252959 - 6253243 | 10283.4 |
| nadph:quinone reductase | SAMN06295900_12339 | Not Available | Negative | 6253262 - 6254287 | 36285.3 |
| hypothetical protein | SAMN06295900_12340 | Not Available | Negative | 6254471 - 6255475 | 37154.1 |
| d-galactarolactone cycloisomerase | SAMN06295900_12341 | Not Available | Negative | 6255498 - 6256652 | 42079.4 |
| regulator of rnase e activity rraa | SAMN06295900_12342 | Not Available | Negative | 6256685 - 6257362 | 23870.8 |
| d-3-phosphoglycerate dehydrogenase | SAMN06295900_12343 | Not Available | Negative | 6257383 - 6258363 | 35671.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.