Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase | SAMN06295900_12324 | Not Available | Positive | 6238068 - 6239078 | 35487.6 |
| amino acid abc transporter membrane protein 1, paat family | SAMN06295900_12325 | Not Available | Positive | 6239412 - 6240122 | 26017.4 |
| amino acid abc transporter membrane protein 2, paat family | SAMN06295900_12326 | Not Available | Positive | 6240124 - 6240873 | 27414.5 |
| amino acid abc transporter atp-binding protein, paat family | SAMN06295900_12327 | Not Available | Positive | 6240901 - 6241629 | 27193.9 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295900_12328 | Not Available | Positive | 6241715 - 6242563 | 30017.2 |
| gluconokinase | SAMN06295900_12329 | Not Available | Positive | 6242697 - 6243215 | 18703.3 |
| gluconate 5-dehydrogenase | SAMN06295900_12330 | Not Available | Positive | 6243217 - 6243990 | 27470.8 |
| hypothetical protein | SAMN06295900_12331 | Not Available | Negative | 6243957 - 6244082 | 4442.32 |
| transcriptional regulator, tetr family | SAMN06295900_12332 | Not Available | Negative | 6244197 - 6244784 | 21379.2 |
| protein of unknown function | SAMN06295900_12333 | Not Available | Negative | 6245326 - 6245988 | 23122.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.