Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar transcriptional activator flhc | SAMN06295900_12252 | Not Available | Positive | 6195090 - 6195623 | 20199.6 |
| hypothetical protein | SAMN06295900_12253 | Not Available | Positive | 6195645 - 6195767 | 4515.8 |
| feruloyl esterase | SAMN06295900_12254 | Not Available | Negative | 6195808 - 6197508 | 60301.1 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN06295900_12255 | Not Available | Negative | 6197575 - 6198315 | 26008.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_12256 | Not Available | Negative | 6198440 - 6199231 | 27895.6 |
| sugar phosphate permease | SAMN06295900_12257 | Not Available | Negative | 6199218 - 6200564 | 47893.4 |
| uncharacterized conserved protein, duf849 family | SAMN06295900_12258 | Not Available | Negative | 6200685 - 6201623 | 34241.2 |
| arac-type dna-binding protein | SAMN06295900_12259 | Not Available | Positive | 6201796 - 6202827 | 38286.6 |
| transposase, mutator family | SAMN06295900_12260 | Not Available | Negative | 6202969 - 6203445 | 17309.9 |
| protein of unknown function | SAMN06295900_12261 | Not Available | Negative | 6203738 - 6204775 | 40639.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.