Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, chemotaxis family, response regulator chey | SAMN06295900_12222 | Not Available | Negative | 6162069 - 6162434 | 12718.1 |
| chemotaxis protein motb | SAMN06295900_12223 | Not Available | Negative | 6162501 - 6163526 | 37178.3 |
| chemotaxis protein mota | SAMN06295900_12224 | Not Available | Negative | 6163554 - 6164414 | 30673.0 |
| flagellar transcriptional activator flhc | SAMN06295900_12225 | Not Available | Negative | 6164587 - 6165150 | 20871.5 |
| flagellar transcriptional activator flhd | SAMN06295900_12226 | Not Available | Negative | 6165272 - 6165592 | 11493.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295900_12227 | Not Available | Positive | 6166165 - 6167232 | 39590.7 |
| dna-binding protein h-ns | SAMN06295900_12228 | Not Available | Negative | 6167477 - 6167776 | 11014.2 |
| hypothetical protein | SAMN06295900_12229 | Not Available | Negative | 6168010 - 6168831 | 29839.7 |
| glucosamine kinase | SAMN06295900_12230 | Not Available | Negative | 6168873 - 6169799 | 30974.9 |
| dna-3-methyladenine glycosylase i | SAMN06295900_12231 | Not Available | Positive | 6170007 - 6170603 | 22198.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.