Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295900_1222 | Not Available | Positive | 6136225 - 6138384 | 78741.1 |
| protein of unknown function | SAMN06295900_1223 | Not Available | Positive | 6138390 - 6140009 | 61305.9 |
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_1224 | Not Available | Positive | 6140009 - 6140269 | 8932.56 |
| protein of unknown function | SAMN06295900_1225 | Not Available | Positive | 6140553 - 6141797 | 47285.4 |
| type vi secretion system protein impg | SAMN06295900_1226 | Not Available | Positive | 6142055 - 6143875 | 66582.8 |
| rna polymerase, sigma 28 subunit, sigd/flia/whig | SAMN06295900_1227 | Not Available | Negative | 6143928 - 6144656 | 27561.8 |
| flagellar biosynthesis protein flhg | SAMN06295900_1228 | Not Available | Negative | 6144687 - 6145565 | 30431.6 |
| flagellar biosynthesis protein flhf | SAMN06295900_1229 | Not Available | Negative | 6145546 - 6147402 | 64903.5 |
| flagellar biosynthesis protein flha | SAMN06295900_12210 | Not Available | Negative | 6147399 - 6149504 | 74909.7 |
| flagellar biosynthetic protein flhb | SAMN06295900_12211 | Not Available | Negative | 6149501 - 6150700 | 43325.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.