Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase ph | SAMN06295900_101542 | Not Available | Negative | 585821 - 586561 | 26790.8 |
| tigr00255 family protein | SAMN06295900_101543 | Not Available | Positive | 586759 - 587682 | 33614.9 |
| guanylate kinase | SAMN06295900_101544 | Not Available | Positive | 587691 - 588359 | 24916.6 |
| dna-directed rna polymerase subunit omega | SAMN06295900_101545 | Not Available | Positive | 588430 - 588633 | 7456.27 |
| (p)ppgpp synthetase i, spot/rela | SAMN06295900_101546 | Not Available | Positive | 588728 - 591109 | 88391.2 |
| Trna-arg | Not Available | Not Available | Positive | 591273 - 591349 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 591422 - 591498 | Not Available |
| zinc transporter | SAMN06295900_101549 | Not Available | Negative | 591581 - 592609 | 38523.4 |
| transcription elongation factor greb | SAMN06295900_101550 | Not Available | Positive | 592779 - 593342 | 20853.3 |
| porin, gbp family | SAMN06295900_101551 | Not Available | Negative | 593442 - 594575 | 40603.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.