Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin activation/secretion protein | SAMN06295900_121107 | Not Available | Negative | 6127251 - 6128897 | 59537.1 |
| general secretion pathway protein k | SAMN06295900_121108 | Not Available | Positive | 6129189 - 6130196 | 36191.8 |
| prevent-host-death family protein | SAMN06295900_121109 | Not Available | Negative | 6130231 - 6130431 | 7518.96 |
| general secretion pathway protein m | SAMN06295900_121110 | Not Available | Negative | 6130901 - 6131410 | 18047.7 |
| general secretion pathway protein l | SAMN06295900_121111 | Not Available | Negative | 6131374 - 6132789 | 50379.6 |
| type ii secretion system protein h (gsph) | SAMN06295900_121112 | Not Available | Negative | 6132809 - 6133306 | 17853.2 |
| type ii secretion system protein g (gspg) | SAMN06295900_121113 | Not Available | Negative | 6133281 - 6133751 | 17345.9 |
| general secretion pathway protein c | SAMN06295900_121114 | Not Available | Positive | 6133882 - 6134319 | 15425.0 |
| type ii secretion system (t2ss), protein f | SAMN06295900_121115 | Not Available | Negative | 6134355 - 6134519 | 5962.65 |
| uncharacterized conserved protein, duf2345 family | SAMN06295900_1221 | Not Available | Positive | 6134520 - 6136220 | 59874.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.