Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_12197 | Not Available | Negative | 6118179 - 6118778 | 21111.5 |
| hypothetical protein | SAMN06295900_12198 | Not Available | Negative | 6118944 - 6119351 | 13779.2 |
| hypothetical protein | SAMN06295900_12199 | Not Available | Negative | 6119379 - 6120194 | 30977.7 |
| peptidylprolyl isomerase | SAMN06295900_121100 | Not Available | Negative | 6120191 - 6121081 | 31025.9 |
| putative sensory transduction regulator | SAMN06295900_121101 | Not Available | Negative | 6121083 - 6121571 | 17499.0 |
| hypothetical protein | SAMN06295900_121102 | Not Available | Negative | 6121667 - 6122332 | 24318.7 |
| putative porin | SAMN06295900_121103 | Not Available | Negative | 6122340 - 6124166 | 66178.0 |
| outer membrane transport energization protein tonb | SAMN06295900_121104 | Not Available | Negative | 6124235 - 6124951 | 25268.2 |
| outer membrane transport energization protein exbd | SAMN06295900_121105 | Not Available | Negative | 6124961 - 6125371 | 14792.0 |
| outer membrane transport energization protein exbb | SAMN06295900_121106 | Not Available | Negative | 6125396 - 6127204 | 64058.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.