Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase d | SAMN06295900_12167 | Not Available | Negative | 6090278 - 6092212 | 69808.6 |
| nitroreductase | SAMN06295900_12168 | Not Available | Positive | 6092422 - 6093090 | 23528.2 |
| polyhydroxyalkanoate depolymerase, intracellular | SAMN06295900_12169 | Not Available | Positive | 6093143 - 6094402 | 46554.6 |
| polyhydroxyalkanoate synthase | SAMN06295900_12170 | Not Available | Negative | 6094462 - 6096375 | 69568.1 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN06295900_12171 | Not Available | Negative | 6096372 - 6097124 | 26855.3 |
| acetate kinase | SAMN06295900_12172 | Not Available | Positive | 6097325 - 6098593 | 44553.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN06295900_12173 | Not Available | Positive | 6098629 - 6099099 | 16583.0 |
| cytochrome p450 | SAMN06295900_12174 | Not Available | Positive | 6099619 - 6101040 | 53085.5 |
| aryl sulfotransferase | SAMN06295900_12175 | Not Available | Positive | 6101033 - 6101944 | 34232.4 |
| methyltransferase domain-containing protein | SAMN06295900_12176 | Not Available | Positive | 6102009 - 6102812 | 29601.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.