Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate kinase | SAMN06295900_12137 | Not Available | Negative | 6055712 - 6056332 | 23108.6 |
| upf0755 protein | SAMN06295900_12138 | Not Available | Negative | 6056334 - 6057344 | 36368.8 |
| hypothetical protein | SAMN06295900_12139 | Not Available | Positive | 6057422 - 6058453 | 36209.6 |
| uncharacterized conserved protein, contains nrde domain | SAMN06295900_12140 | Not Available | Positive | 6058467 - 6059288 | 30207.8 |
| predicted n-acyltransferase, gnat family | SAMN06295900_12141 | Not Available | Negative | 6059296 - 6059769 | 16792.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06295900_12142 | Not Available | Negative | 6059829 - 6060683 | 29745.8 |
| hypothetical protein | SAMN06295900_12143 | Not Available | Negative | 6060708 - 6061706 | 35083.9 |
| uncharacterized domain 1-containing protein | SAMN06295900_12144 | Not Available | Negative | 6061768 - 6062253 | 16882.2 |
| stress responsive a/b barrel domain | SAMN06295900_12145 | Not Available | Negative | 6062270 - 6062572 | 11100.4 |
| macrolide transport system atp-binding/permease protein | SAMN06295900_12146 | Not Available | Negative | 6062684 - 6064672 | 69706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.