Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN06295900_12127 | Not Available | Negative | 6047333 - 6048301 | 34143.5 |
| hypothetical protein | SAMN06295900_12128 | Not Available | Negative | 6048613 - 6048894 | 10296.3 |
| hypothetical protein | SAMN06295900_12129 | Not Available | Positive | 6049331 - 6049777 | 16827.5 |
| lipid-binding sylf domain-containing protein | SAMN06295900_12130 | Not Available | Positive | 6049905 - 6050504 | 20452.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295900_12131 | Not Available | Negative | 6050609 - 6051676 | 40223.4 |
| hypothetical protein | SAMN06295900_12132 | Not Available | Negative | 6051931 - 6052287 | 12341.9 |
| hypothetical protein | SAMN06295900_12133 | Not Available | Negative | 6052397 - 6053155 | 26429.5 |
| tatd dnase family protein | SAMN06295900_12134 | Not Available | Negative | 6053221 - 6054012 | 29476.0 |
| phosphinothricin acetyltransferase | SAMN06295900_12135 | Not Available | Negative | 6054036 - 6054560 | 18943.5 |
| dna polymerase iii, delta prime subunit | SAMN06295900_12136 | Not Available | Negative | 6054593 - 6055630 | 37233.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.