Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, narl family, captular synthesis response regulator rcsb | SAMN06295900_12117 | Not Available | Negative | 6036307 - 6037014 | 25550.9 |
| hypothetical protein | SAMN06295900_12118 | Not Available | Negative | 6037084 - 6037338 | 9173.73 |
| hypothetical protein | SAMN06295900_12119 | Not Available | Negative | 6037508 - 6037840 | 12819.7 |
| hypothetical protein | SAMN06295900_12120 | Not Available | Positive | 6038479 - 6039270 | 29216.8 |
| putative phosphoribosyl transferase | SAMN06295900_12121 | Not Available | Positive | 6039311 - 6039991 | 23751.3 |
| stage v sporulation protein spovr/ycgb, involved in spore cortex formation | SAMN06295900_12122 | Not Available | Negative | 6040001 - 6041695 | 66442.4 |
| hypothetical protein | SAMN06295900_12123 | Not Available | Negative | 6041692 - 6042960 | 48914.2 |
| putative serine protein kinase, prka | SAMN06295900_12124 | Not Available | Negative | 6043166 - 6045088 | 73539.3 |
| transcriptional regulator, laci family | SAMN06295900_12125 | Not Available | Negative | 6045787 - 6046800 | 35825.0 |
| hypothetical protein | SAMN06295900_12126 | Not Available | Negative | 6046850 - 6047227 | 13063.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.