Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN06295900_120121 | Not Available | Positive | 6000027 - 6000935 | 32591.3 |
| haloacid dehalogenase-like hydrolase | SAMN06295900_120122 | Not Available | Negative | 6001337 - 6003454 | 78087.9 |
| arac-type dna-binding protein | SAMN06295900_120123 | Not Available | Positive | 6004402 - 6005112 | 25527.9 |
| hypothetical protein | SAMN06295900_120124 | Not Available | Positive | 6005349 - 6006578 | 44025.9 |
| adp-ribosylglycohydrolase | SAMN06295900_120125 | Not Available | Negative | 6007228 - 6008406 | 42848.4 |
| nad:arginine adp-ribosyltransferase | SAMN06295900_120126 | Not Available | Negative | 6008406 - 6008861 | 16464.2 |
| immunity protein 22 | SAMN06295900_120127 | Not Available | Negative | 6009108 - 6009488 | 14404.7 |
| hypothetical protein | SAMN06295900_120128 | Not Available | Negative | 6009503 - 6009865 | 13266.8 |
| hypothetical protein | SAMN06295900_120129 | Not Available | Negative | 6010255 - 6010371 | 4174.26 |
| toxic protein syme | SAMN06295900_120130 | Not Available | Positive | 6011571 - 6011804 | 8856.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.