Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN06295900_12091 | Not Available | Negative | 5971550 - 5972203 | 22864.2 |
| cys-trna(pro) deacylase | SAMN06295900_12092 | Not Available | Negative | 5972323 - 5972814 | 17873.6 |
| integrase/recombinase xerd | SAMN06295900_12093 | Not Available | Negative | 5972884 - 5973819 | 34922.8 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN06295900_12094 | Not Available | Negative | 5973816 - 5974304 | 17263.7 |
| epoxyqueuosine reductase | SAMN06295900_12095 | Not Available | Negative | 5974352 - 5975674 | 47341.1 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN06295900_12096 | Not Available | Positive | 5975692 - 5976228 | 19494.1 |
| n-acetylmuramoyl-l-alanine amidase | SAMN06295900_12097 | Not Available | Positive | 5976210 - 5977772 | 55958.7 |
| hypothetical protein | SAMN06295900_12098 | Not Available | Positive | 5977870 - 5978751 | 31385.5 |
| thioredoxin | SAMN06295900_12099 | Not Available | Positive | 5978840 - 5979688 | 31673.8 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN06295900_120100 | Not Available | Negative | 5979763 - 5980629 | 30289.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.