Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit clpp | SAMN06295900_12071 | Not Available | Positive | 5954681 - 5955316 | 23270.8 |
| chromate transporter | SAMN06295900_12072 | Not Available | Negative | 5955327 - 5955857 | 18826.2 |
| chromate transporter | SAMN06295900_12073 | Not Available | Negative | 5955854 - 5956456 | 20702.0 |
| transcriptional regulator, marr family | SAMN06295900_12074 | Not Available | Negative | 5956576 - 5957061 | 17859.7 |
| protein of unknown function | SAMN06295900_12075 | Not Available | Positive | 5957244 - 5957807 | 20475.4 |
| putative transcriptional regulator | SAMN06295900_12076 | Not Available | Positive | 5957819 - 5958049 | 8140.12 |
| superoxide dismutase, fe-mn family | SAMN06295900_12077 | Not Available | Negative | 5958178 - 5958756 | 21400.9 |
| exodeoxyribonuclease vii large subunit | SAMN06295900_12078 | Not Available | Negative | 5958973 - 5960373 | 51361.8 |
| lipid-a-disaccharide kinase | SAMN06295900_12079 | Not Available | Positive | 5960764 - 5961798 | 36795.5 |
| hypothetical protein | SAMN06295900_12080 | Not Available | Positive | 5961779 - 5961985 | 7480.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.