Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN06295900_101522 | Not Available | Positive | 566373 - 569261 | 102954.0 |
| protein of unknown function | SAMN06295900_101523 | Not Available | Positive | 569258 - 570604 | 47417.3 |
| nitroreductase family protein | SAMN06295900_101524 | Not Available | Positive | 570672 - 571769 | 39471.3 |
| acetyltransferase (gnat) family protein | SAMN06295900_101525 | Not Available | Positive | 571962 - 572468 | 18623.7 |
| septum site-determining protein minc | SAMN06295900_101526 | Not Available | Positive | 572768 - 573523 | 26891.3 |
| septum site-determining protein mind | SAMN06295900_101527 | Not Available | Positive | 573592 - 574407 | 29562.8 |
| cell division topological specificity factor mine | SAMN06295900_101528 | Not Available | Positive | 574420 - 574674 | 9407.48 |
| h+/cl-antiporter clca | SAMN06295900_101529 | Not Available | Negative | 574705 - 576249 | 55631.6 |
| hypothetical protein | SAMN06295900_101530 | Not Available | Negative | 576206 - 576331 | 4719.78 |
| hypothetical protein | SAMN06295900_101531 | Not Available | Positive | 576407 - 576547 | 5082.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.