Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_12031 | Not Available | Negative | 5910972 - 5911424 | 15830.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN06295900_12032 | Not Available | Negative | 5911596 - 5912561 | 34965.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | SAMN06295900_12033 | Not Available | Negative | 5912565 - 5913020 | 16075.2 |
| dna replication and repair protein radc | SAMN06295900_12034 | Not Available | Positive | 5913088 - 5913924 | 29622.6 |
| lsu ribosomal protein l28p | SAMN06295900_12035 | Not Available | Positive | 5914267 - 5914500 | 8838.68 |
| lsu ribosomal protein l33p | SAMN06295900_12036 | Not Available | Positive | 5914518 - 5914685 | 6356.85 |
| l-aspartate oxidase | SAMN06295900_12037 | Not Available | Positive | 5914962 - 5916560 | 57958.1 |
| nicotinate-nucleotide pyrophosphorylase | SAMN06295900_12038 | Not Available | Negative | 5916679 - 5917584 | 31749.2 |
| quinolinate synthetase | SAMN06295900_12039 | Not Available | Negative | 5917599 - 5918744 | 40914.2 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN06295900_12040 | Not Available | Negative | 5918841 - 5920226 | 53114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.