Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal small subunit pseudouridine synthase a | SAMN06295900_12021 | Not Available | Positive | 5901789 - 5902493 | 25835.0 |
| hypothetical protein | SAMN06295900_12022 | Not Available | Positive | 5902653 - 5902841 | 6629.56 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295900_12023 | Not Available | Negative | 5902834 - 5903862 | 37654.3 |
| cdp-4-dehydro-6-deoxyglucose reductase | SAMN06295900_12024 | Not Available | Positive | 5903934 - 5904965 | 38065.4 |
| acetylornithine aminotransferase apoenzyme | SAMN06295900_12025 | Not Available | Positive | 5905228 - 5906412 | 43156.1 |
| hypothetical protein | SAMN06295900_12026 | Not Available | Positive | 5906409 - 5906903 | 17637.4 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN06295900_12027 | Not Available | Negative | 5907089 - 5907805 | 25649.7 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN06295900_12028 | Not Available | Negative | 5907805 - 5908581 | 28426.5 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN06295900_12029 | Not Available | Negative | 5908610 - 5909779 | 42190.5 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN06295900_12030 | Not Available | Negative | 5909798 - 5910748 | 33019.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.