Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin reductase (nadph) | SAMN06295900_101512 | Not Available | Negative | 553974 - 554969 | 35344.0 |
| dna translocase ftsk | SAMN06295900_101513 | Not Available | Positive | 555387 - 557699 | 83533.6 |
| outer membrane lipoprotein carrier protein | SAMN06295900_101514 | Not Available | Positive | 557823 - 558542 | 25483.4 |
| recombination protein mgsa | SAMN06295900_101515 | Not Available | Positive | 558583 - 559905 | 48754.1 |
| seryl-trna synthetase | SAMN06295900_101516 | Not Available | Positive | 559998 - 561290 | 47146.3 |
| Trna-ser | Not Available | Not Available | Positive | 561465 - 561552 | Not Available |
| polygalacturonase | SAMN06295900_101518 | Not Available | Positive | 562060 - 563730 | 57714.8 |
| nadph:quinone reductase | SAMN06295900_101519 | Not Available | Negative | 563803 - 564717 | 31893.4 |
| predicted ester cyclase | SAMN06295900_101520 | Not Available | Negative | 564728 - 565183 | 16503.8 |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_101521 | Not Available | Positive | 565279 - 566199 | 33281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.