Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | SAMN06295900_10139 | Not Available | Positive | 41304 - 42419 | 39820.2 |
| glutamate 5-kinase | SAMN06295900_10140 | Not Available | Positive | 42522 - 43640 | 39436.6 |
| cnp1-like family protein | SAMN06295900_10141 | Not Available | Negative | 43676 - 44245 | 20586.1 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN06295900_10142 | Not Available | Negative | 44349 - 45014 | 25401.5 |
| prolyl-trna synthetase | SAMN06295900_10143 | Not Available | Positive | 45267 - 47033 | 64732.2 |
| membrane protein, marc family | SAMN06295900_10144 | Not Available | Positive | 47047 - 47643 | 21547.6 |
| hypoxanthine phosphoribosyltransferase | SAMN06295900_10145 | Not Available | Negative | 47689 - 48240 | 20506.9 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN06295900_10146 | Not Available | Negative | 48323 - 49690 | 49560.2 |
| abc-type uncharacterized transport system, permease component | SAMN06295900_10147 | Not Available | Positive | 49766 - 50677 | 32594.2 |
| uncharacterized protein | SAMN06295900_10148 | Not Available | Positive | 50681 - 50956 | 9618.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.