Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_101471 | Not Available | Positive | 511733 - 512731 | 36370.9 |
| hypothetical protein | SAMN06295900_101472 | Not Available | Negative | 512803 - 514020 | 41853.6 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_101473 | Not Available | Negative | 514252 - 515487 | 43756.9 |
| camphor resistance protein crcb | SAMN06295900_101475 | Not Available | Positive | 515908 - 516294 | 13572.1 |
| pii-like signaling protein | SAMN06295900_101476 | Not Available | Positive | 516349 - 516693 | 12862.5 |
| yggt family protein | SAMN06295900_101477 | Not Available | Negative | 516767 - 517330 | 20757.6 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN06295900_101478 | Not Available | Negative | 517398 - 518345 | 32250.7 |
| hypothetical protein | SAMN06295900_101479 | Not Available | Positive | 518737 - 518898 | 6438.96 |
| hypothetical protein | SAMN06295900_101480 | Not Available | Positive | 519184 - 519468 | 9926.09 |
| asparaginase | SAMN06295900_101481 | Not Available | Negative | 519617 - 520678 | 37113.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.