Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_101461 | Not Available | Negative | 505356 - 506039 | 24997.7 |
| protein of unknown function | SAMN06295900_101462 | Not Available | Negative | 506311 - 506670 | 13226.1 |
| hypothetical protein | SAMN06295900_101463 | Not Available | Negative | 506667 - 506894 | 8689.8 |
| hypothetical protein | SAMN06295900_101464 | Not Available | Positive | 507283 - 507474 | 7052.22 |
| hypothetical protein | SAMN06295900_101465 | Not Available | Negative | 507903 - 508190 | 10321.1 |
| hypothetical protein | SAMN06295900_101466 | Not Available | Positive | 508659 - 508946 | 10664.8 |
| hypothetical protein | SAMN06295900_101467 | Not Available | Positive | 509105 - 509389 | 10532.6 |
| hypothetical protein | SAMN06295900_101468 | Not Available | Positive | 509407 - 509664 | 9406.23 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN06295900_101469 | Not Available | Positive | 510089 - 510835 | 24882.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_101470 | Not Available | Negative | 510882 - 511601 | 25718.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.